Software

• geno2pheno[theo]
• geno2pheno[integrase]
• EuResist
• Permutation importance (paper in Bioinformatics) [link at MPI Inf]
• vipR (paper in Bioinformatics)
• imputeMerger
• Re-Annotator (paper in PLoS ONE; preprint in bioRxiv)
• SleepScore (paper in NeuroImage)
• Gene2Surface

There are some more things on my GitHub or SourceForge repositories.